Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | Set_01_ATM_minus_versus_SCID.phenotype_ATM_minus_versus_SCID.cls #ATM_minus_versus_SCID |
| Phenotype | phenotype_ATM_minus_versus_SCID.cls#ATM_minus_versus_SCID |
| Upregulated in class | SCID |
| GeneSet | NCI_ARF6 DOWNSTREAM PATHWAY |
| Enrichment Score (ES) | -0.4934113 |
| Normalized Enrichment Score (NES) | -1.4668826 |
| Nominal p-value | 0.052154195 |
| FDR q-value | 0.8122733 |
| FWER p-Value | 1.0 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | RAC1 | 1423734_at 1437674_at 1451086_s_at | 932 | 2.048 | 0.0371 | No | ||
| 2 | ARFIP2 | 1424240_at 1435498_at | 2220 | 1.258 | 0.0272 | No | ||
| 3 | COPA | 1415706_at 1437274_at | 3342 | 0.955 | 0.0131 | No | ||
| 4 | RHOA | 1437628_s_at | 5201 | 0.607 | -0.0481 | No | ||
| 5 | PLD2 | 1417237_at 1457252_x_at | 7040 | 0.382 | -0.1171 | No | ||
| 6 | AP2M1 | 1442227_at 1442429_at 1443338_at 1450894_a_at 1457122_at | 9828 | 0.116 | -0.2398 | No | ||
| 7 | NME2 | 1448808_a_at | 10034 | 0.099 | -0.2453 | No | ||
| 8 | PIP5K1A | 1421833_at 1421834_at 1450389_s_at | 11427 | -0.022 | -0.3080 | No | ||
| 9 | PLD1 | 1425739_at 1437112_at 1437113_s_at | 11599 | -0.037 | -0.3144 | No | ||
| 10 | KALRN | 1429796_at 1436066_at 1442341_at 1442554_s_at 1445900_at 1448023_at 1457690_at 1457899_at 1459065_at | 13266 | -0.188 | -0.3832 | No | ||
| 11 | RAB11A | 1449256_a_at | 13928 | -0.248 | -0.4037 | No | ||
| 12 | ARF1 | 1420920_a_at 1426390_a_at | 15895 | -0.465 | -0.4753 | Yes | ||
| 13 | CLTA | 1421062_s_at 1434540_a_at 1444328_at | 16099 | -0.492 | -0.4655 | Yes | ||
| 14 | AP2A1 | 1460724_at | 16329 | -0.523 | -0.4556 | Yes | ||
| 15 | TIAM1 | 1418057_at 1444373_at 1453887_a_at | 16453 | -0.538 | -0.4403 | Yes | ||
| 16 | MAPK1 | 1419568_at 1426585_s_at 1442876_at 1453104_at | 16534 | -0.551 | -0.4226 | Yes | ||
| 17 | NME1 | 1424110_a_at 1435277_x_at | 16657 | -0.571 | -0.4060 | Yes | ||
| 18 | CLTB | 1453063_at 1456797_at 1460740_at | 18526 | -0.926 | -0.4553 | Yes | ||
| 19 | RAB11FIP3 | 1438022_at 1457864_at | 19243 | -1.063 | -0.4466 | Yes | ||
| 20 | ARFGAP1 | 1427245_at 1445067_at | 19336 | -1.091 | -0.4085 | Yes | ||
| 21 | PLAUR | 1452521_a_at | 19345 | -1.093 | -0.3663 | Yes | ||
| 22 | GOSR2 | 1419371_s_at 1419372_at | 19509 | -1.140 | -0.3295 | Yes | ||
| 23 | MAPK3 | 1427060_at | 20549 | -1.598 | -0.3148 | Yes | ||
| 24 | ARF6 | 1418822_a_at 1418823_at 1418824_at | 20664 | -1.665 | -0.2554 | Yes | ||
| 25 | GGA3 | 1438008_at | 21185 | -2.048 | -0.1995 | Yes | ||
| 26 | CD4 | 1419696_at 1427779_a_at | 21569 | -2.571 | -0.1171 | Yes | ||
| 27 | GBF1 | 1415709_s_at 1415757_at 1432677_at 1438207_at | 21789 | -3.444 | 0.0067 | Yes |
